Comparative Study on the Expression of Organ among Three Mainstream Anatomical Ontologies

Corresponding author: Zhu Yan, zhuyan166@126.com

DOI: 10.12201/bmr.202209.00009

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  Abstract: Human anatomy knowledge is an important part of biomedical knowledge, and its standardized and formalized expression lays the foundation for the expression of microscopic and macroscopic knowledge such as physiology, pathology, and disease. By comparing the design patterns, classification and mapping (database cross reference) of three mainstream anatomical ontologies of SCT, Uberon and FMA on organs, analyzing their similarities and differences in organ classification, term mapping, expression of laterality and bilaterality, etc., to provide some reference for the research and construction of anatomical ontology in other fields.

  Key words: SNOMED CT（SCT）; Uberon; The Foundational Model of Anatomy ontology, FMA

  Submit time: 13 September 2022

  Copyright: The copyright holder for this preprint is the author/funder, who has granted biomedRxiv a license to display the preprint in perpetuity.
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