YOU Qing-hai. Construction of a TFF3-Related Prognostic Model for Lung Adenocarcinoma Based on Lasso-Cox Regression and Its Predictive Value for Immunotherapy. 2025. biomedRxiv.202509.00054
Construction of a TFF3-Related Prognostic Model for Lung Adenocarcinoma Based on Lasso-Cox Regression and Its Predictive Value for Immunotherapy
Corresponding author: YOU Qing-hai, amormor@126.com
DOI: 10.12201/bmr.202509.00054
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Abstract: Objective To construct a prognostic model of Lung Adenocarcinoma (LUAD) related to intestinal Trefoil Factor 3 (TFF3) and evaluate the predictive value of this model for immunotherapy. Methods Tumor immune estimation resource(TIMER), UALCAN,and CPTAC databases were utilized to analyze TFF3 expression and its correlation with LUAD staging. The tumor immune single cell hub(TISCH) database was employed to examine TFF3 expression across different cell types within lung cancer tissues,followed by localization analysis. Immunohistochemical expression of TFF3 in LUAD tissues was analyzed using the human protein atlas (HPA) database. LUAD patients in the cancer genome atlas (TGCA) database were stratified into two groups based on TFF3 expression levels. Differential gene expression analysis identified TFF3-associated differentially expressed genes. Univariate survival analysis and Lasso-Cox regression were then employed to construct TFF3-related LUAD prognostic signatures and their risk score calculation formulas. The predictive efficacy of these signatures was evaluated using Kaplan-Meier curves and receiver operating characteristic (ROC) curves. A LUAD prognostic nomogram was established based on risk score,T stage,N stage,age,and gender to enable intuitive prediction of LUAD prognosis using parameters including risk score. Results TFF3 mRNA and protein expression were higher in LUAD tissues than in normal controls,with increased expression correlating with higher LUAD staging. Single-cell data analysis revealed TFF3 expression primarily localized to tumor cells within LUAD tissues, with negligible expression in immune cells and other cell types. Immunohistochemistry confirmed TFF3 expression predominantly occurred within LUAD tumor cells. Differential analysis identified 600 TFF3-associated differentially expressed genes. Univariate analysis further selected 12 differentially expressed genes with prognostic value. Using Lasso-Cox regression,an 8-gene TFF3-associated prognostic signature was constructed. The calculated risk scores showed that LUAD patients in the low-risk group had significantly better overall prognosis than those in the high-risk group (P<0.001),with good sensitivity and specificity. Risk scores increased with LUAD stage progression. A risk-score-based nomogram, integrated with clinical parameters, effectively predicted patient prognosis. Conclusion The TFF3-based prognostic model not only predicts overall survival but also forecasts immunotherapy efficacy.
Key words: Lung adenocarcinoma; TFF3; Immune checkpoint inhibitor; Nomogram; Lasso-Cox regressionSubmit time: 26 September 2025
Copyright: The copyright holder for this preprint is the author/funder, who has granted biomedRxiv a license to display the preprint in perpetuity. -
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ID Submit time Number Download 1 2025-09-16 10.12201/bmr.202509.00054V1
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